Resonance Energy Transfer in a Genetically Engineered Polypeptide Results in Unanticipated Fluorescence Intensity

The fluorescence intensity of a C-terminal acceptor chromophore, N-(7-dimethylamino-4-methyl coumarin (DACM), increased proportionally with 280 nm irradiation of an increasing number of donor tryptophan residues located on a β-sheet forming polypeptide. The fluorescence intensity of the acceptor chromophore increased even as the length of the β-sheet edge approached 256 Å, well beyond the Förster radius for the tryptophan–acceptor chromophore pair. The folding of the peptides under investigation was verified by circular dichroism (CD) and deep UV resonance Raman experiments. Control experiments showed that the enhancement of DACM fluorescence occurred concomitantly with peptide folding. In other control experiments, the DACM fluorescence intensity of the solutions of tryptophan and DACM did not show any enhancement of DACM fluorescence with increasing tryptophan concentrations. Formation of fibrillar aggregates of the substrate peptides prepared for the fluorescence studies was undetectable by thioflavin T (ThT) fluorescence.     

Unexpected formation of dinaphthoaza-17-crown-5 ether containing γ-aminopiperidine subunit

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The conformation of epinephrine in polar solvents: an NMR study

Structural Chemistry - Epinephrine (Epi) is a physiologically important catecholamine. Molecular conformation of Epi controls the interactions with other molecules and its biological effects. There...     

Assessing the diagnostic power of variables measured with a detection limit

The phenomenon of the limit of detection (LoD) often happens in many practical situations because of technique and instrument limitations. In the literature, some reports show that, in general, to apply conventional methods to evaluate the diagnostic power of variables while ignoring LoD could be seriously biased. Although the area under the receiver operating characteristic (ROC) curve can be estimated consistently if the distribution of variables are known. In practical situation, such information is usually not available. On the other hand, it has been proved that the area under ROC curve of a variable with a LoD and no distribution assumptions is usually biased no matter what kinds of replacement strategies are used. However, there is a lack of similar studies on the partial area under ROC curve (pAUC), and because this measure is usually preferred in practice, it is of interest to examine whether the estimate of pAUC of a variable measured with a LoD behaves the same. In this study, we found that for some LoD scenarios, and even without distribution assumption, consistent estimate of pAUC can be constructed. When the consistent estimate of pAUC cannot be obtained, the bias can be ineffectual in practical situations, and the proposed estimator can be a good approximation of pAUC. Numerical studies using simulated data sets and real data examples are reported.     

The dynamics of vortex sources in a deformation flow

This paper is concerned with the dynamics of vortex sources in a deformation flow. The case of two vortex sources is shown to be integrable by quadratures. In addition, the relative equilibria (of the reduced system) are examined in detail and it is shown that in this case the trajectory of vortex sources is an ellipse.